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        If you use plots from MultiQC in a publication or presentation, please cite:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411
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        Tool Citations

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        About MultiQC

        This report was generated using MultiQC, version 1.28

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/MultiQC/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2025-07-15, 18:43 PDT based on data in: /space/grp/rschwartz/rschwartz/model_cell_correctness/work/04/215162a70fe7d53281be31030e930f/multiqc

        Subclass Assignments

        Subclass assignments after mapping to appropriate level of granularity.

        Created with MultiQC

        Class Assignments

        Class assignments after mapping to appropriate level of granularity.

        Created with MultiQC

        Family Assignments

        Family assignments after mapping to appropriate level of granularity.

        Created with MultiQC

        Global Assignments

        Global assignments after mapping to appropriate level of granularity.

        Created with MultiQC

        Study Correctness

        Correctness of study assignments.

        Created with MultiQC

        Reference Correctness

        Correctness of reference assignments.

        Created with MultiQC

        Method Correctness

        Correctness by method.

        Created with MultiQC

        Sex Correctness

        Correctness by sex.

        Created with MultiQC

        Genotype Correctness

        Correctness by genotype.

        Created with MultiQC

        Treatment Correctness

        Correctness by treatment.

        Created with MultiQC

        MultiQC v1.28 - Written by Phil Ewels, available on GitHub.

        This report uses Plotly, jQuery, jQuery UI, Bootstrap and FileSaver.js.